guru/sci-biology/cytoscape-bin/cytoscape-bin-3.10.3.ebuild
Andres Becerra 59228d13e9
sci-biology/jalview-bin: restrict to JVM 17
Signed-off-by: Andrés Becerra <andres.becerra@gmail.com>
2025-03-30 20:05:22 +01:00

41 lines
1003 B
Bash

# Copyright 2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI="8"
inherit desktop java-pkg-2
DESCRIPTION="A visualization platform for molecular interaction networks"
HOMEPAGE="https://www.cytoscape.org/"
SRC_URI="https://github.com/cytoscape/cytoscape/releases/download/${PV}/cytoscape-unix-${PV}.tar.gz"
S="${WORKDIR}"
LICENSE="LGPL-2.1"
SLOT="0"
KEYWORDS="~amd64 ~x86"
RDEPEND="=virtual/jre-17"
src_install() {
MY_PN="cytoscape"
MYW="${WORKDIR}/${MY_PN}-unix-${PV}"
insinto "/opt/${MY_PN}"
doins -r ${MYW}/apps
doins -r ${MYW}/framework
doins -r ${MYW}/sampleData
cd ${MYW}
sh gen_vmoptions.sh
doins Cytoscape.vmoptions
exeinto "/opt/${MY_PN}"
doexe "${MYW}/${MY_PN}.sh"
dosym "${EPREFIX}/opt/${MY_PN}/${MY_PN}.sh" "${EPREFIX}/opt/bin/${MY_PN}"
exeinto "/opt/${MY_PN}/framework/bin"
doexe framework/bin/karaf
newicon framework/cytoscape_logo_512.png cytoscape_logo.png
make_desktop_entry ${MY_PN} CytoScape cytoscape_logo Science
}