sci-physics/SU2: 7.0.6 version bump

Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru>

sci-physics/SU2/Manifest

@@ -4,3 +4,6 @@ DIST SU2-7.0.4.tar.gz 20516147 BLAKE2B 21f45e4918bbc6a72bf47ad61d3301abed50a7cf5
 DIST SU2-7.0.5-TestCases.tar.gz 444209661 BLAKE2B a7b14a3ee679a28a3a4530ddca45f39fdc2c0bc5f29fe20e6c9f04d03dee6ca08f98648989b0160ee8742621b539e2f4af9e8bdfb802c3e460a9f3b7e1be3dda SHA512 f21acbaccce66685323566a3f856ceb5fbd36764a8dea875af839520b46be8f7e26491ccb855243f93e4ae948534574080e986faafc2a84c86754fe39f74e240
 DIST SU2-7.0.5-Tutorials.tar.gz 64282246 BLAKE2B 9c8823df5bbda1be80f03dfa6d9de4b4263904acbee15f6928d3758a9b25c84ace59bf02847798838cbf3236961f51589e851e342f288961b2f2a62e28de216c SHA512 2b7c98cc4d060c850572e45418d4ddf38843ced3349a3fb807c1d32f0e5aabf578f8944918e3fc63a32161385eaf69b4742d24ef41d21b43006d5b881a89953b
 DIST SU2-7.0.5.tar.gz 20526328 BLAKE2B 0c3b16269f9d8356eaecde991853fe184188b98df62186c56780ee34b26995763adbac0acca53db1625ac9b0dfadc3348eac792e700e66be00a174ff056e017d SHA512 283da35aa4f6bac4d7451506c6b84d98a18dfe7630adfc17764511fba8171b15c36ee80807bbfc1c55e39e196f8ed304fff3eb1182dfac15aa6a86a9613e51ad
+DIST SU2-7.0.6-TestCases.tar.gz 447944839 BLAKE2B 5212ef7bf69bb40120ca2af99a02f2a89ae6cc0a1e048e57409ee1d2911f930452f4a5ef668126d6b7144c3f81d50bdadd0bcc810f0472740ccbbb6605e5a07d SHA512 c976450e7e17df58b47cbf14d18c4435f977a70dc086d5b74ea584ae14b3204632ef87b2dce6a456396179f1b72ef8eba83065a42d978b8d6966d5446decbd3c
+DIST SU2-7.0.6-Tutorials.tar.gz 64282244 BLAKE2B 3b0ce136c9fa5c3e0ffc585e28b1a60470eeaf2518cbef539fccc185f79cd41a889e3c3c8a0ada3f488cfe1d2d0115e2768267c6ef4502b882b07f909f6f382c SHA512 4aaf39b98cbbe4c9e12d78027b0ee2b3d30fd614d1e48092d8bfd25c312a06a1621b2192653a7d8ac767762b06ae339ab6fb77e81f833efdb419ce09f92dec2f
+DIST SU2-7.0.6.tar.gz 20531872 BLAKE2B 30e59bc6876223d87429b79f101a5705f989096a1b81725aa20012567d15b08b6a8a24140cc76b35c6c3657a1d6afa85d56da699ab38dac85714e296d7ad8531 SHA512 a4619dd969c6d9cb20de1d373c8e0af9d56654f9f96d919662897db4c3c8bf52b45fb1239065d480ba1b4f05ba7a17c9540ff3fe47fb0d96864736200cda8bcc

sci-physics/SU2/SU2-7.0.6.ebuild

@@ -0,0 +1,115 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{6,7,8} )
+
+inherit meson python-single-r1
+
+DESCRIPTION="SU2: An Open-Source Suite for Multiphysics Simulation and Design"
+HOMEPAGE="https://su2code.github.io/"
+SRC_URI="
+	https://github.com/su2code/SU2/archive/v${PV}.tar.gz -> ${P}.tar.gz
+	test? ( https://github.com/su2code/TestCases/archive/v${PV}.tar.gz -> ${P}-TestCases.tar.gz )
+	tutorials? ( https://github.com/su2code/Tutorials/archive/v${PV}.tar.gz -> ${P}-Tutorials.tar.gz )
+"
+
+LICENSE="LGPL-2.1"
+SLOT="0"
+KEYWORDS="~amd64"
+
+# cgns, metis, parmetis are bundled;
+# omp is disable as it's experimental;
+# pastix is disabled as it's try to find bundled libs;
+IUSE="cgns -mkl +mpi openblas tecio test tutorials"
+RESTRICT="!test? ( test )"
+REQUIRED_USE="
+	${PYTHON_REQUIRED_USE}
+	mkl? ( !openblas )
+"
+
+RDEPEND="
+	${PYTHON_DEPS}
+	mpi? ( virtual/mpi[cxx] )
+	mkl? ( sci-libs/mkl )
+	openblas? ( sci-libs/openblas )
+"
+DEPEND="
+	${RDEPEND}
+	tecio? ( dev-libs/boost:= )
+"
+BDEPEND="virtual/pkgconfig"
+
+PATCHES=(
+	"${FILESDIR}/${P}-fix-env.patch"
+	"${FILESDIR}/${PN}-7.0.4-unbundle_boost.patch"
+	"${FILESDIR}/${PN}-7.0.4-fix-python-optimize.patch"
+)
+
+DOCS=( "LICENSE.md" "README.md" "SU2_PY/documentation.txt" )
+
+src_unpack() {
+	unpack "${P}.tar.gz"
+	if use test ; then
+		einfo "Unpacking ${P}-TestCases.tar.gz to /var/tmp/portage/sci-physics/${P}/work/${P}/TestCases"
+		tar -C "${P}"/TestCases --strip-components=1 -xzf "${DISTDIR}/${P}-TestCases.tar.gz" || die
+	fi
+	if use tutorials ; then
+		einfo "Unpacking ${P}-Tutorials.tar.gz to /var/tmp/portage/sci-physics/${P}/work/${P}"
+		mkdir "${P}"/Tutorials
+		tar -C "${P}"/Tutorials --strip-components=1 -xzf "${DISTDIR}/${P}-Tutorials.tar.gz" || die
+	fi
+}
+
+src_configure() {
+	local emesonargs=(
+		-Denable-autodiff=false
+		-Denable-directdiff=false
+		-Denable-pastix=false
+		-Denable-pywrapper=false
+		-Dwith-omp=false
+		$(meson_feature mpi with-mpi)
+		$(meson_use cgns enable-cgns)
+		$(meson_use mkl enable-mkl)
+		$(meson_use openblas enable-openblas)
+		$(meson_use tecio enable-tecio)
+		$(meson_use test enable-tests)
+	)
+	meson_src_configure
+}
+
+src_test() {
+	ln -s ../../${P}-build/SU2_CFD/src/SU2_CFD SU2_PY/SU2_CFD
+	ln -s ../../${P}-build/SU2_DEF/src/SU2_DEF SU2_PY/SU2_DEF
+	ln -s ../../${P}-build/SU2_DOT/src/SU2_DOT SU2_PY/SU2_DOT
+	ln -s ../../${P}-build/SU2_GEO/src/SU2_GEO SU2_PY/SU2_GEO
+	ln -s ../../${P}-build/SU2_MSH/src/SU2_MSH SU2_PY/SU2_MSH
+	ln -s ../../${P}-build/SU2_SOL/src/SU2_SOL SU2_PY/SU2_SOL
+
+	export SU2_RUN="${S}/SU2_PY"
+	export SU2_HOME="${S}"
+	export PATH=$PATH:$SU2_RUN
+	export PYTHONPATH=$PYTHONPATH:$SU2_RUN
+
+	einfo "Running UnitTests ..."
+	../${P}-build/UnitTests/test_driver
+
+	pushd TestCases/
+	use mpi && python parallel_regression.py
+	use mpi || python serial_regression.py
+	use tutorials && use mpi && python tutorials.py
+	popd
+}
+
+src_install() {
+	meson_src_install
+	mkdir -p "${ED}$(python_get_sitedir)"
+	mv "${ED}"/usr/bin/{FSI,SU2,*.py} -t "${ED}$(python_get_sitedir)"
+	python_optimize "${D}/$(python_get_sitedir)"
+
+	if use tutorials ; then
+		insinto "/usr/share/${P}"
+		doins -r Tutorials
+	fi
+}

sci-physics/SU2/files/SU2-7.0.6-fix-env.patch

@@ -0,0 +1,12 @@
+diff -Naur old_env/UnitTests/meson.build new_env/UnitTests/meson.build
+--- old_env/UnitTests/meson.build	2020-06-15 17:03:43.000000000 +0300
++++ new_env/UnitTests/meson.build	2020-06-15 17:04:35.000000000 +0300
+@@ -26,7 +26,7 @@
+     test_driver = executable(
+         'test_driver',
+         unit_test_files,
+-        install : true,
++        install : false,
+         dependencies : [su2_cfd_dep, common_dep, su2_deps, catch2_dep],
+         cpp_args: ['-fPIC', default_warning_flags, su2_cpp_args]
+     )